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Macros
#define	MAXTARGET 2000

#define	MAXQUERY 30

#define	MAXLINE 1000

#define	MAXSEQUENCE 100000

#define	ILOOPUPPERLIMITDEFAULT 15

#define	BLOOPUPPERLIMITDEFAULT 15

#define	MEAN 500

#define	STDDEV 300

#define	SAMPLESIZE 5000

#define	MIRNA_LENGTH_MEAN 22

#define	MIRNA_LENGTH_STDDEV 0

#define	MAXTARGETNUMBER 100000

#define	MAXQUERYNUMBER 100000

#define	MAXORTHOLOGNUMBER 10

#define	BINNUMBER 500

#define	FITLOWERCUTOFFABSOLUTE 2.0

#define	FITUPPERCUTOFFPERCENT 1.0

#define	SETNAME_3UTR_FLY "3utr_fly"

#define	SETNAME_3UTR_WORM "3utr_worm"

#define	SETNAME_3UTR_HUMAN "3utr_human"

#define	XI_SLOPE_3UTR_FLY (-0.03144)

#define	XI_INTERCEPT_3UTR_FLY (0.7201)

#define	THETA_SLOPE_3UTR_FLY (-0.003429)

#define	THETA_INTERCEPT_3UTR_FLY (0.01634)

#define	XI_SLOPE_3UTR_WORM (-0.01074)

#define	XI_INTERCEPT_3UTR_WORM (1.769)

#define	THETA_SLOPE_3UTR_WORM (-0.001154)

#define	THETA_INTERCEPT_3UTR_WORM (0.1419)

#define	XI_SLOPE_3UTR_HUMAN (-0.01237)

#define	XI_INTERCEPT_3UTR_HUMAN (1.901)

#define	THETA_SLOPE_3UTR_HUMAN (-0.001678)

#define	THETA_INTERCEPT_3UTR_HUMAN (0.1349)

Macro Definition Documentation

◆ BINNUMBER

#define BINNUMBER 500

Definition at line 33 of file globals.h.

◆ BLOOPUPPERLIMITDEFAULT

#define BLOOPUPPERLIMITDEFAULT 15

Definition at line 19 of file globals.h.

◆ FITLOWERCUTOFFABSOLUTE

#define FITLOWERCUTOFFABSOLUTE 2.0

Definition at line 34 of file globals.h.

◆ FITUPPERCUTOFFPERCENT

#define FITUPPERCUTOFFPERCENT 1.0

Definition at line 35 of file globals.h.

◆ ILOOPUPPERLIMITDEFAULT

#define ILOOPUPPERLIMITDEFAULT 15

Definition at line 18 of file globals.h.

◆ MAXLINE

#define MAXLINE 1000

Definition at line 15 of file globals.h.

◆ MAXORTHOLOGNUMBER

#define MAXORTHOLOGNUMBER 10

Definition at line 31 of file globals.h.

◆ MAXQUERY

#define MAXQUERY 30

Definition at line 14 of file globals.h.

◆ MAXQUERYNUMBER

#define MAXQUERYNUMBER 100000

Definition at line 29 of file globals.h.

◆ MAXSEQUENCE

#define MAXSEQUENCE 100000

Definition at line 16 of file globals.h.

◆ MAXTARGET

#define MAXTARGET 2000

Definition at line 13 of file globals.h.

◆ MAXTARGETNUMBER

#define MAXTARGETNUMBER 100000

Definition at line 28 of file globals.h.

◆ MEAN

#define MEAN 500

Definition at line 21 of file globals.h.

◆ MIRNA_LENGTH_MEAN

#define MIRNA_LENGTH_MEAN 22

Definition at line 25 of file globals.h.

◆ MIRNA_LENGTH_STDDEV

#define MIRNA_LENGTH_STDDEV 0

Definition at line 26 of file globals.h.

◆ SAMPLESIZE

#define SAMPLESIZE 5000

Definition at line 23 of file globals.h.

◆ SETNAME_3UTR_FLY

#define SETNAME_3UTR_FLY "3utr_fly"

Definition at line 37 of file globals.h.

◆ SETNAME_3UTR_HUMAN

#define SETNAME_3UTR_HUMAN "3utr_human"

Definition at line 39 of file globals.h.

◆ SETNAME_3UTR_WORM

#define SETNAME_3UTR_WORM "3utr_worm"

Definition at line 38 of file globals.h.

◆ STDDEV

#define STDDEV 300

Definition at line 22 of file globals.h.

◆ THETA_INTERCEPT_3UTR_FLY

#define THETA_INTERCEPT_3UTR_FLY (0.01634)

Definition at line 44 of file globals.h.

◆ THETA_INTERCEPT_3UTR_HUMAN

#define THETA_INTERCEPT_3UTR_HUMAN (0.1349)

Definition at line 54 of file globals.h.

◆ THETA_INTERCEPT_3UTR_WORM

#define THETA_INTERCEPT_3UTR_WORM (0.1419)

Definition at line 49 of file globals.h.

◆ THETA_SLOPE_3UTR_FLY

#define THETA_SLOPE_3UTR_FLY (-0.003429)

Definition at line 43 of file globals.h.

◆ THETA_SLOPE_3UTR_HUMAN

#define THETA_SLOPE_3UTR_HUMAN (-0.001678)

Definition at line 53 of file globals.h.

◆ THETA_SLOPE_3UTR_WORM

#define THETA_SLOPE_3UTR_WORM (-0.001154)

Definition at line 48 of file globals.h.

◆ XI_INTERCEPT_3UTR_FLY

#define XI_INTERCEPT_3UTR_FLY (0.7201)

Definition at line 42 of file globals.h.

◆ XI_INTERCEPT_3UTR_HUMAN

#define XI_INTERCEPT_3UTR_HUMAN (1.901)

Definition at line 52 of file globals.h.

◆ XI_INTERCEPT_3UTR_WORM

#define XI_INTERCEPT_3UTR_WORM (1.769)

Definition at line 47 of file globals.h.

◆ XI_SLOPE_3UTR_FLY

#define XI_SLOPE_3UTR_FLY (-0.03144)

Definition at line 41 of file globals.h.

◆ XI_SLOPE_3UTR_HUMAN

#define XI_SLOPE_3UTR_HUMAN (-0.01237)

Definition at line 51 of file globals.h.

◆ XI_SLOPE_3UTR_WORM

#define XI_SLOPE_3UTR_WORM (-0.01074)

Definition at line 46 of file globals.h.

Macros