#include <stdio.h>
#include <math.h>
#include "l12_proto.h"
#include "giop.h"
#include "amoeba.h"
#include <gsl/gsl_errno.h>
#include <gsl/gsl_vector.h>
#include <gsl/gsl_blas.h>
#include <gsl/gsl_multifit_nlin.h>
#include <gsl/gsl_linalg.h>
#include <gsl/gsl_poly.h>

Include dependency graph for giop.c:

Classes
struct	fit_data_str

Functions
void	freeArray (void **a, int32_t m)

void	freeDArray (double **a, int32_t m)

void	giop_int_tab_file (char file, int nx, float x, float **y)

void	giop_ctl_start (giopstr *g, float chl)

void	giop_ctl_init (giopstr *g, int nwave, float wave[], float aw[], float bbw[])

int	giop_ran (int recnum)

void	giop_model (giopstr g, double par[], int nwave, float wave[], float aw[], float bbw[], float foq[], float aph[], float adg[], float bbp[], double rrs[], double dfdpar, double *parstar)

void	giop_model_iterate (giopstr g, double par[], int nwave, float wave[], float aw[], float bbw[], float foq[], float aph[], float adg[], float bbp[], float acdom[], float anap[], float bbph[], float bbnap[], double rrs[], double dfdpar, double *parstar)

double	giop_amb (FITSTRUCT *ambdata, double par[])

int	fit_giop_amb (giopstr g, double Rrs[], double wts[], double par[], double Rrs_fit[], int16 itercnt)

int	giop_lm_fdf (const gsl_vector parv, void data, gsl_vector f, gsl_matrix J)

int	giop_lm_f (const gsl_vector parv, void data, gsl_vector *f)

int	giop_lm_df (const gsl_vector parv, void data, gsl_matrix *J)

int	fit_giop_lm (giopstr g, double Rrs[], double wts[], double par[], double chi, int16 *itercnt)

int	fit_giop_svd (giopstr *g, double rrs[], double wts[], double par[])

int	fit_giop_svd_siop (giopstr g, double rrs[], double wts[], double par[], double chi)

float32	giop_chl (giopstr g, int16 iopf, double par[], float chl_err)

float	rrs_above_to_below (float Rrs)

float	rrs_below_to_above (float rrs_s)

void	run_giop (l2str *l2rec)

void	get_giop (l2str l2rec, l2prodstr p, float prod[])

int16 *	get_iter_giop (l2str *l2rec)

int16 *	get_flags_giop (l2str *l2rec)

void	iops_giop (l2str *l2rec)

float *	giop_get_chl_pointer ()

float *	giop_get_adg_pointer ()

float *	giop_get_bbp_pointer ()

float *	giop_get_aph_pointer ()

float **	giop_get_fitpar_pointer ()

float *	giop_get_bbp_s_pointer ()

Function Documentation

◆ fit_giop_amb()

int fit_giop_amb	(	giopstr *	g,
		double	Rrs[],
		double	wts[],
		double	par[],
		double	Rrs_fit[],
		int16 *	itercnt
	)

Definition at line 975 of file giop.c.

◆ fit_giop_lm()

int fit_giop_lm	(	giopstr *	g,
		double	Rrs[],
		double	wts[],
		double	par[],
		double *	chi,
		int16 *	itercnt
	)

Definition at line 1123 of file giop.c.

◆ fit_giop_svd()

int fit_giop_svd	(	giopstr *	g,
		double	rrs[],
		double	wts[],
		double	par[]
	)

Definition at line 1207 of file giop.c.

◆ fit_giop_svd_siop()

int fit_giop_svd_siop	(	giopstr *	g,
		double	rrs[],
		double	wts[],
		double	par[],
		double *	chi
	)

Definition at line 1322 of file giop.c.

◆ freeArray()

void freeArray	(	void **	a,
		int32_t	m
	)

Definition at line 100 of file giop.c.

◆ freeDArray()

void freeDArray	(	double **	a,
		int32_t	m
	)

Definition at line 108 of file giop.c.

◆ get_flags_giop()

int16* get_flags_giop ( l2str * l2rec )

Definition at line 2722 of file giop.c.

◆ get_giop()

void get_giop	(	l2str *	l2rec,
		l2prodstr *	p,
		float	prod[]
	)

Definition at line 2538 of file giop.c.

◆ get_iter_giop()

int16* get_iter_giop ( l2str * l2rec )

Definition at line 2710 of file giop.c.

◆ giop_amb()

double giop_amb	(	FITSTRUCT *	ambdata,
		double	par[]
	)

Definition at line 955 of file giop.c.

◆ giop_chl()

float32 giop_chl	(	giopstr *	g,
		int16	iopf,
		double	par[],
		float *	chl_err
	)

Definition at line 1569 of file giop.c.

◆ giop_ctl_init()

void giop_ctl_init	(	giopstr *	g,
		int	nwave,
		float	wave[],
		float	aw[],
		float	bbw[]
	)

Definition at line 215 of file giop.c.

◆ giop_ctl_start()

void giop_ctl_start	(	giopstr *	g,
		float	chl
	)

Definition at line 160 of file giop.c.

◆ giop_get_adg_pointer()

float* giop_get_adg_pointer ( )

Definition at line 2768 of file giop.c.

◆ giop_get_aph_pointer()

float* giop_get_aph_pointer ( )

Definition at line 2782 of file giop.c.

◆ giop_get_bbp_pointer()

float* giop_get_bbp_pointer ( )

Definition at line 2775 of file giop.c.

◆ giop_get_bbp_s_pointer()

float* giop_get_bbp_s_pointer ( )

Definition at line 2797 of file giop.c.

◆ giop_get_chl_pointer()

float* giop_get_chl_pointer ( )

Definition at line 2761 of file giop.c.

◆ giop_get_fitpar_pointer()

float** giop_get_fitpar_pointer ( )

Definition at line 2789 of file giop.c.

◆ giop_int_tab_file()

void giop_int_tab_file	(	char *	file,
		int	nx,
		float *	x,
		float **	y
	)

Definition at line 121 of file giop.c.

◆ giop_lm_df()

int giop_lm_df	(	const gsl_vector *	parv,
		void *	data,
		gsl_matrix *	J
	)

Definition at line 1113 of file giop.c.

◆ giop_lm_f()

int giop_lm_f	(	const gsl_vector *	parv,
		void *	data,
		gsl_vector *	f
	)

Definition at line 1109 of file giop.c.

◆ giop_lm_fdf()

int giop_lm_fdf	(	const gsl_vector *	parv,
		void *	data,
		gsl_vector *	f,
		gsl_matrix *	J
	)

Definition at line 1038 of file giop.c.

◆ giop_model()

void giop_model	(	giopstr *	g,
		double	par[],
		int	nwave,
		float	wave[],
		float	aw[],
		float	bbw[],
		float	foq[],
		float	aph[],
		float	adg[],
		float	bbp[],
		double	rrs[],
		double **	dfdpar,
		double **	parstar
	)

Definition at line 580 of file giop.c.

◆ giop_model_iterate()

void giop_model_iterate	(	giopstr *	g,
		double	par[],
		int	nwave,
		float	wave[],
		float	aw[],
		float	bbw[],
		float	foq[],
		float	aph[],
		float	adg[],
		float	bbp[],
		float	acdom[],
		float	anap[],
		float	bbph[],
		float	bbnap[],
		double	rrs[],
		double **	dfdpar,
		double **	parstar
	)

Definition at line 792 of file giop.c.

◆ giop_ran()

int giop_ran ( int recnum )

Definition at line 569 of file giop.c.

◆ iops_giop()

void iops_giop ( l2str * l2rec )

Definition at line 2734 of file giop.c.

◆ rrs_above_to_below()

float rrs_above_to_below ( float Rrs )

Definition at line 1598 of file giop.c.

◆ rrs_below_to_above()

float rrs_below_to_above ( float rrs_s )

Definition at line 1607 of file giop.c.

◆ run_giop()

void run_giop ( l2str * l2rec )

Definition at line 1616 of file giop.c.

Classes

Functions